BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B04SP1|AL430488
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig978 1820 0.0
>3x_Contig978
Length = 3477
Score = 1820 bits (918), Expect = 0.0
Identities = 944/950 (99%), Gaps = 2/950 (0%)
Strand = Plus / Minus
Query: 1 gtgttccattctgtacatcagatacgggatgtccaatttccaatattatcccaaaattca 60
||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 3453 gtgttacattctgtacatcagatacgggatgttctatttccaatattatcccaaaattca 3394
Query: 61 atgagcttgtgttcaaaaaccaatggaaattagcattggacaaactattggaaactaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3393 atgagcttgtgttcaaaaaccaatggaaattagcattggacaaactattggaaactaaca 3334
Query: 121 atttccctgaatttactggtagagtttgtcccgctccatgtcaaggttcttgtaccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3333 atttccctgaatttactggtagagtttgtcccgctccatgtcaaggttcttgtaccttgg 3274
Query: 181 ctatcattgacgatccagtcggcatcaagtctgttgaaagattgattatcgataacgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3273 ctatcattgacgatccagtcggcatcaagtctgttgaaagattgattatcgataacgctt 3214
Query: 241 tcaaagaaggatggattaaaccttgtccacctgaagtcagaacaggtaagattgttgccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3213 tcaaagaaggatggattaaaccttgtccacctgaagtcagaacaggtaagattgttgccg 3154
Query: 301 ttatcggctctggccctgcaggtatggcttgcgcagaccaattgaacagagctggtcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3153 ttatcggctctggccctgcaggtatggcttgcgcagaccaattgaacagagctggtcatt 3094
Query: 361 cagtagttgtttacgagagggctgatcgttgcggtggtttgttgatgtacggtattccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3093 cagtagttgtttacgagagggctgatcgttgcggtggtttgttgatgtacggtattccaa 3034
Query: 421 atatgaaattggacaagtcaattgttcaaagacgtttggatctattagcagccgaa-gtg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3033 atatgaaattggacaagtcaattgttcaaagacgtttggatctattagcagccgaaggtg 2974
Query: 480 ttcaattcatcacaaacactgaggttggtaaagatatctccgttgaggaattgaaatcta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2973 ttcaattcatcacaaacactgaggttggtaaagatatctccgttgaggaattgaaatcta 2914
Query: 540 agttcgatgctattgtttacaccgttggctcgaccattcctagagacttgagaattcctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2913 agttcgatgctattgtttacaccgttggctcgaccattcctagagacttgagaattcctg 2854
Query: 600 gtcgtgaattgaaaaacatcgactttgcaatgactttgctaaagagcaacacgcaagctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2853 gtcgtgaattgaaaaacatcgactttgcaatgactttgctaaagagcaacacgcaagctt 2794
Query: 660 tattagacagagacttagaaacaattaagaaacaaatcaaggggaagaaagttattgtta 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2793 tattagacagagacttagaaacaattaagaaacaaatcaaggggaagaaagttattgtta 2734
Query: 720 ttggtggtggtgataccggtaatgattgtttaggtacttctgtcagacat-ggcgctgcg 778
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2733 ttggtggtggtgataccggtaatgattgtttaggtacttctgtcagacatgggcgctgcg 2674
Query: 779 tcagttctaaactttgagttgttaccacaaccacctaacgaacgttctaaggacaatcct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 tcagttctaaactttgagttgttaccacaaccacctaacgaacgttctaaggacaatcct 2614
Query: 839 tggcctcaatggccacgtatcatgagaattgattacgggcatgcggaagtgaaagaacat 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2613 tggcctcaatggccacgtatcatgagaattgattacgggcatgcggaagtgaaagaacat 2554
Query: 899 tacggaagagatcctcgtgagttctgcatcttatccaaggagtttattgg 948
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2553 tacggaagagatcctcgtgagtactgcatcttatccaaggagtttattgg 2504
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7166
Number of Sequences: 1807
Number of extensions: 7166
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)